User blog comment:The Milkman/Indoctrination: You're Doing It Wrong/@comment-4952006-20120621174813

At this point I have given up on either attacking or defending the IT since it doesnt really serve any purpose now. Regardless of its merits or lack thereof depending on your view, it is a fan theory and would therefore never be implemented because, if for no other reason, the developers think they are smarter than us. I have chosen therefore to use the "in my head" ending that I came up with in 30 min using deductive reasoning and which I posted on my blog page.

That being said, and I am citing this not as evidence for or against, but a point of fact that you did not mention in relation to indoctrination itself is that it being executed in a dream state is established at the Ardat-Yakshi monastery in ME3. Rila, goes through a dream-state form of indoctrination.